Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 AC079328.2-201ENST00000561241 3354 ntBASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD4Q9H0A8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 NORAD-201ENST00000565493 5339 ntBASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
COMMD4Q9H0A8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 AC117947.1-201ENST00000427448 529 ntBASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 AC112907.2-201ENST00000448639 330 ntBASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 AC067930.6-201ENST00000623257 4947 ntBASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD4Q9H0A8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms