Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
FOXP3Q9BZS1 AC026691.1-201ENST00000602502 2017 ntBASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 AC091607.1-201ENST00000490318 1060 ntBASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 AP002469.2-201ENST00000531724 424 ntBASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 AL353801.3-201ENST00000609898 542 ntBASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 AL049757.1-201ENST00000616842 1596 ntBASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXP3Q9BZS1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
FOXP3Q9BZS1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.42
FOXP3Q9BZS1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
FOXP3Q9BZS1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
FOXP3Q9BZS1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 AL022342.1-201ENST00000400363 863 ntBASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 NUS1P2-201ENST00000417358 873 ntBASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 IGHV3-47-201ENST00000425060 335 ntBASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 AP005901.3-202ENST00000581653 237 ntBASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 STK25P1-201ENST00000585406 838 ntBASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.64■□□□□ 0.41
FOXP3Q9BZS1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 NSUN5P1-202ENST00000421140 1535 ntBASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 NSUN5P2-203ENST00000457352 1529 ntBASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXP3Q9BZS1 RN7SL606P-201ENST00000472779 293 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms