Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 CA15P1-201ENST00000481698 905 ntBASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 AC008687.5-201ENST00000593746 558 ntBASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 MIR5787-201ENST00000611784 55 ntBASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 AC104640.1-201ENST00000562617 2109 ntBASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 AC005104.2-201ENST00000427818 678 ntBASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 AC073195.1-201ENST00000607241 877 ntBASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 SBF1P1-201ENST00000444527 5631 ntBASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 LINC02228-204ENST00000642115 2962 ntBASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM3Q9BZL3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14□□□□□ -0.17
SMIM3Q9BZL3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM3Q9BZL3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
SMIM3Q9BZL3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms