Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 PMS2P4-201ENST00000412466 1052 ntBASIC16.87■□□□□ 0.29
HDAC8Q9BY41 TFAMP1-201ENST00000412727 736 ntBASIC16.87■□□□□ 0.29
HDAC8Q9BY41 METTL21AP1-201ENST00000438852 635 ntBASIC16.87■□□□□ 0.29
HDAC8Q9BY41 RARRES2P8-201ENST00000566335 367 ntBASIC16.87■□□□□ 0.29
HDAC8Q9BY41 AC027612.4-201ENST00000605371 583 ntBASIC16.87■□□□□ 0.29
HDAC8Q9BY41 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 HTR7P1-202ENST00000624664 4411 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 AL023806.1-201ENST00000603994 1649 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SPDYE11-202ENST00000450699 704 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 TIMM8BP1-201ENST00000452384 211 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SPDYE9P-201ENST00000570642 692 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 AL031055.1-201ENST00000606362 631 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SPDYE10P-202ENST00000612005 668 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SPDYE8P-202ENST00000612377 668 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 AC108860.2-201ENST00000562760 2183 ntBASIC16.86■□□□□ 0.29
HDAC8Q9BY41 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.86■□□□□ 0.29
HDAC8Q9BY41 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 KRT8P48-201ENST00000515599 1220 ntBASIC16.85■□□□□ 0.29
HDAC8Q9BY41 CYP2A7P1-201ENST00000595391 815 ntBASIC16.85■□□□□ 0.29
HDAC8Q9BY41 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 AC092053.1-201ENST00000605787 1936 ntBASIC16.85■□□□□ 0.29
HDAC8Q9BY41 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC8Q9BY41 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms