Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 TP73-AS1-210ENST00000637775 1455 ntBASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 CYP2T1P-202ENST00000641596 2535 ntBASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 BX276092.5-203ENST00000456199 560 ntBASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC091607.1-201ENST00000490318 1060 ntBASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 NTF6B-201ENST00000591913 560 ntBASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AL121672.3-201ENST00000608644 468 ntBASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 HLA-A-202ENST00000376806 1854 ntBASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SHANK2-AS3Q9BTD1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHANK2-AS3Q9BTD1 PCDH8P1-201ENST00000428983 2773 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms