Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 FAM86GP-201ENST00000448322 971 ntBASIC16.32■□□□□ 0.2
CMKLR1Q99788 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.32■□□□□ 0.2
CMKLR1Q99788 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMKLR1Q99788 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.32■□□□□ 0.2
CMKLR1Q99788 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CMKLR1Q99788 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CMKLR1Q99788 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.32■□□□□ 0.2
CMKLR1Q99788 AC093512.1-201ENST00000617969 520 ntBASIC16.32■□□□□ 0.2
CMKLR1Q99788 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.32■□□□□ 0.2
CMKLR1Q99788 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CMKLR1Q99788 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMKLR1Q99788 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMKLR1Q99788 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMKLR1Q99788 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CMKLR1Q99788 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 AL671277.1-201ENST00000429656 993 ntBASIC16.31■□□□□ 0.2
CMKLR1Q99788 AC140658.5-201ENST00000438532 169 ntBASIC16.31■□□□□ 0.2
CMKLR1Q99788 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.31■□□□□ 0.2
CMKLR1Q99788 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMKLR1Q99788 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 AL355306.1-201ENST00000415580 579 ntBASIC16.3■□□□□ 0.2
CMKLR1Q99788 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 SPDYE11-202ENST00000450699 704 ntBASIC16.3■□□□□ 0.2
CMKLR1Q99788 RN7SL589P-201ENST00000481268 310 ntBASIC16.3■□□□□ 0.2
CMKLR1Q99788 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 SPCS2P1-201ENST00000561636 679 ntBASIC16.3■□□□□ 0.2
CMKLR1Q99788 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 SPDYE9P-201ENST00000570642 692 ntBASIC16.3■□□□□ 0.2
CMKLR1Q99788 SPDYE10P-202ENST00000612005 668 ntBASIC16.3■□□□□ 0.2
CMKLR1Q99788 SPDYE8P-202ENST00000612377 668 ntBASIC16.3■□□□□ 0.2
CMKLR1Q99788 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CMKLR1Q99788 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMKLR1Q99788 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms