Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LITAFQ99732 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
LITAFQ99732 KRT89P-201ENST00000620027 1478 ntBASIC11.37□□□□□ -0.59
LITAFQ99732 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
LITAFQ99732 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
LITAFQ99732 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.37□□□□□ -0.59
LITAFQ99732 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.36□□□□□ -0.59
LITAFQ99732 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.36□□□□□ -0.59
LITAFQ99732 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.36□□□□□ -0.59
LITAFQ99732 CRYGFP-201ENST00000418459 633 ntBASIC11.36□□□□□ -0.59
LITAFQ99732 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 TSPY17P-201ENST00000450329 467 ntBASIC11.36□□□□□ -0.59
LITAFQ99732 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
LITAFQ99732 CNP-204ENST00000472031 1019 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 DLX3-202ENST00000512495 834 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC11.36□□□□□ -0.59
LITAFQ99732 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 AC024243.1-201ENST00000609234 778 ntBASIC11.36□□□□□ -0.59
LITAFQ99732 AC019129.2-201ENST00000609837 1235 ntBASIC11.36□□□□□ -0.59
LITAFQ99732 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.36□□□□□ -0.59
LITAFQ99732 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
LITAFQ99732 AC138035.3-201ENST00000622706 2791 ntBASIC11.36□□□□□ -0.59
LITAFQ99732 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LITAFQ99732 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.36□□□□□ -0.59
LITAFQ99732 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.36□□□□□ -0.59
LITAFQ99732 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.36□□□□□ -0.59
LITAFQ99732 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LITAFQ99732 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.36□□□□□ -0.59
LITAFQ99732 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LITAFQ99732 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.35□□□□□ -0.59
LITAFQ99732 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
LITAFQ99732 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
LITAFQ99732 GGT4P-201ENST00000623672 1708 ntBASIC11.35□□□□□ -0.59
LITAFQ99732 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LITAFQ99732 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LITAFQ99732 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.35□□□□□ -0.59
LITAFQ99732 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LITAFQ99732 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms