Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
IFT140Q96RY7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
IFT140Q96RY7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
IFT140Q96RY7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
IFT140Q96RY7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
IFT140Q96RY7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
IFT140Q96RY7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
IFT140Q96RY7 SLC25A1P3-201ENST00000395415 828 ntBASIC27.78■■■□□ 2.04
IFT140Q96RY7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC27.78■■■□□ 2.04
IFT140Q96RY7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC27.78■■■□□ 2.04
IFT140Q96RY7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC27.78■■■□□ 2.04
IFT140Q96RY7 RN7SL219P-201ENST00000582872 296 ntBASIC27.78■■■□□ 2.04
IFT140Q96RY7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC27.78■■■□□ 2.04
IFT140Q96RY7 KRT8P12-202ENST00000472924 1397 ntBASIC27.78■■■□□ 2.04
IFT140Q96RY7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC27.78■■■□□ 2.04
IFT140Q96RY7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
IFT140Q96RY7 NOC2LP1-202ENST00000452600 2235 ntBASIC27.78■■■□□ 2.04
IFT140Q96RY7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC27.77■■■□□ 2.04
IFT140Q96RY7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC27.77■■■□□ 2.04
IFT140Q96RY7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC27.77■■■□□ 2.04
IFT140Q96RY7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC27.77■■■□□ 2.04
IFT140Q96RY7 AC010319.3-201ENST00000597028 470 ntBASIC27.77■■■□□ 2.04
IFT140Q96RY7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 KRT8P49-201ENST00000604166 1432 ntBASIC27.77■■■□□ 2.04
IFT140Q96RY7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 AL033527.5-202ENST00000641632 1098 ntBASIC27.77■■■□□ 2.04
IFT140Q96RY7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC27.77■■■□□ 2.04
IFT140Q96RY7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC27.77■■■□□ 2.04
IFT140Q96RY7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
IFT140Q96RY7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC27.77■■■□□ 2.04
IFT140Q96RY7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC27.77■■■□□ 2.04
IFT140Q96RY7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
IFT140Q96RY7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
IFT140Q96RY7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC27.76■■■□□ 2.04
IFT140Q96RY7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC27.76■■■□□ 2.04
IFT140Q96RY7 AL139099.5-201ENST00000635274 300 ntBASIC27.76■■■□□ 2.04
IFT140Q96RY7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC27.76■■■□□ 2.04
IFT140Q96RY7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
IFT140Q96RY7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
IFT140Q96RY7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
IFT140Q96RY7 AC018665.1-201ENST00000622927 1362 ntBASIC27.76■■■□□ 2.03
IFT140Q96RY7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
IFT140Q96RY7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
IFT140Q96RY7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
IFT140Q96RY7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.03
IFT140Q96RY7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC27.76■■■□□ 2.03
IFT140Q96RY7 AC099336.1-201ENST00000417053 1171 ntBASIC27.76■■■□□ 2.03
IFT140Q96RY7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC27.76■■■□□ 2.03
IFT140Q96RY7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC27.76■■■□□ 2.03
IFT140Q96RY7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
IFT140Q96RY7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC27.76■■■□□ 2.03
IFT140Q96RY7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
IFT140Q96RY7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC27.75■■■□□ 2.03
IFT140Q96RY7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
IFT140Q96RY7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
IFT140Q96RY7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC27.75■■■□□ 2.03
IFT140Q96RY7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
IFT140Q96RY7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
IFT140Q96RY7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
IFT140Q96RY7 SPDYE17-201ENST00000412399 783 ntBASIC27.75■■■□□ 2.03
IFT140Q96RY7 KRT43P-201ENST00000434019 910 ntBASIC27.75■■■□□ 2.03
IFT140Q96RY7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
IFT140Q96RY7 MIR8072-201ENST00000614241 80 ntBASIC27.75■■■□□ 2.03
IFT140Q96RY7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC27.75■■■□□ 2.03
IFT140Q96RY7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC27.75■■■□□ 2.03
IFT140Q96RY7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
IFT140Q96RY7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC27.75■■■□□ 2.03
IFT140Q96RY7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
IFT140Q96RY7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC27.75■■■□□ 2.03
IFT140Q96RY7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 SDHAP3-202ENST00000515467 728 ntBASIC27.74■■■□□ 2.03
IFT140Q96RY7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC27.74■■■□□ 2.03
IFT140Q96RY7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
IFT140Q96RY7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC27.74■■■□□ 2.03
IFT140Q96RY7 RETN-203ENST00000629642 400 ntTSL 5 BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms