Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
NR1H4Q96RI1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 AC008622.2-201ENST00000617006 1229 ntBASIC16.12■□□□□ 0.17
NR1H4Q96RI1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NR1H4Q96RI1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 ME2P1-201ENST00000426028 1970 ntBASIC16.11■□□□□ 0.17
NR1H4Q96RI1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 AC239809.2-201ENST00000415381 517 ntBASIC16.11■□□□□ 0.17
NR1H4Q96RI1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.11■□□□□ 0.17
NR1H4Q96RI1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms