Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.9□□□□□ -0.18
ZNF48Q96MX3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 REXO1L11P-201ENST00000620964 1927 ntBASIC13.9□□□□□ -0.18
ZNF48Q96MX3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF48Q96MX3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ZNF48Q96MX3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ZNF48Q96MX3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 FAM58CP-201ENST00000435741 640 ntBASIC13.89□□□□□ -0.19
ZNF48Q96MX3 AC074386.1-202ENST00000463561 864 ntBASIC13.89□□□□□ -0.19
ZNF48Q96MX3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 AC023141.13-201ENST00000604991 943 ntBASIC13.89□□□□□ -0.19
ZNF48Q96MX3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 AL023806.1-201ENST00000603994 1649 ntBASIC13.89□□□□□ -0.19
ZNF48Q96MX3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
ZNF48Q96MX3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 TNRC18P3-201ENST00000441896 2691 ntBASIC13.88□□□□□ -0.19
ZNF48Q96MX3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 AL135999.2-201ENST00000622438 1686 ntBASIC13.88□□□□□ -0.19
ZNF48Q96MX3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 CXCL1P1-201ENST00000502804 216 ntBASIC13.88□□□□□ -0.19
ZNF48Q96MX3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 RFPL4AP1-201ENST00000530883 850 ntBASIC13.88□□□□□ -0.19
ZNF48Q96MX3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 AC027612.4-201ENST00000605371 583 ntBASIC13.88□□□□□ -0.19
ZNF48Q96MX3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 AC007064.4-201ENST00000637740 555 ntBASIC13.88□□□□□ -0.19
ZNF48Q96MX3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms