Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 AC010654.1-201ENST00000615722 808 ntBASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.79■□□□□ 0.12
CTHRC1Q96CG8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 AC091167.2-201ENST00000579581 588 ntBASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 MIR4492-201ENST00000581627 80 ntBASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 AC006277.1-201ENST00000624348 1610 ntBASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTHRC1Q96CG8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 MPDU1-223ENST00000582151 728 ntBASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTHRC1Q96CG8 AL391256.1-201ENST00000443260 1855 ntBASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CTHRC1Q96CG8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 AC079776.4-201ENST00000511039 504 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms