Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 LAGE3P1-201ENST00000425356 484 ntBASIC16.43■□□□□ 0.22
UBE2E3Q969T4 AF238378.1-201ENST00000526806 358 ntBASIC16.43■□□□□ 0.22
UBE2E3Q969T4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 AC006557.2-201ENST00000592985 1240 ntBASIC16.43■□□□□ 0.22
UBE2E3Q969T4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 AC105020.1-201ENST00000435356 2205 ntBASIC16.42■□□□□ 0.22
UBE2E3Q969T4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 AC073648.2-201ENST00000510116 352 ntBASIC16.42■□□□□ 0.22
UBE2E3Q969T4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 TERC-201ENST00000602385 541 ntBASIC16.42■□□□□ 0.22
UBE2E3Q969T4 AC004706.3-202ENST00000621574 984 ntBASIC16.42■□□□□ 0.22
UBE2E3Q969T4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.42■□□□□ 0.22
UBE2E3Q969T4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2E3Q969T4 AC092068.3-201ENST00000587894 2016 ntBASIC16.41■□□□□ 0.22
UBE2E3Q969T4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.41■□□□□ 0.22
UBE2E3Q969T4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 AC021087.4-201ENST00000563761 564 ntBASIC16.41■□□□□ 0.22
UBE2E3Q969T4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2E3Q969T4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 1387.2 ms