Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 HLA-A-202ENST00000376806 1854 ntBASIC19.32■□□□□ 0.68
TNFRSF25Q93038 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFRSF25Q93038 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 IL9RP2-201ENST00000423948 1312 ntBASIC19.31■□□□□ 0.68
TNFRSF25Q93038 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 AC093909.1-201ENST00000504731 1122 ntBASIC19.31■□□□□ 0.68
TNFRSF25Q93038 AC091167.2-201ENST00000579581 588 ntBASIC19.31■□□□□ 0.68
TNFRSF25Q93038 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF25Q93038 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 FAM185BP-201ENST00000443595 716 ntBASIC19.3■□□□□ 0.68
TNFRSF25Q93038 HCG4B-203ENST00000450128 991 ntBASIC19.3■□□□□ 0.68
TNFRSF25Q93038 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 Z83851.2-201ENST00000609564 659 ntBASIC19.3■□□□□ 0.68
TNFRSF25Q93038 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 AC084018.2-201ENST00000613093 2607 ntBASIC19.3■□□□□ 0.68
TNFRSF25Q93038 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TNFRSF25Q93038 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 VN2R19P-201ENST00000442399 1052 ntBASIC19.29■□□□□ 0.68
TNFRSF25Q93038 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.29■□□□□ 0.68
TNFRSF25Q93038 SLC25A1P1-201ENST00000528351 927 ntBASIC19.29■□□□□ 0.68
TNFRSF25Q93038 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms