Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 AC079602.3-201ENST00000623931 403 ntBASIC17■□□□□ 0.31
CKAP2Q8WWK9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 ANKRD20A8P-203ENST00000641373 517 ntBASIC17■□□□□ 0.31
CKAP2Q8WWK9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 AL603832.2-201ENST00000566195 2125 ntBASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 MIR718-201ENST00000390190 70 ntBASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKAP2Q8WWK9 AL596087.1-201ENST00000400979 1969 ntBASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms