Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 PCDHA1-201ENST00000378133 2726 ntBASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
RAB3IL1Q8TBN0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB3IL1Q8TBN0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB3IL1Q8TBN0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.08■□□□□ 0.33
RAB3IL1Q8TBN0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB3IL1Q8TBN0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 AC067930.6-201ENST00000623257 4947 ntBASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB3IL1Q8TBN0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 AC092171.3-201ENST00000610122 2651 ntBASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 AC068472.1-201ENST00000474589 881 ntBASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 AC019129.2-201ENST00000609837 1235 ntBASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAB3IL1Q8TBN0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms