Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 NME2P1-201ENST00000426182 414 ntBASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 AC109322.1-201ENST00000524499 1264 ntBASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 DUX4L27-201ENST00000554796 1261 ntBASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 AL022326.1-202ENST00000641533 845 ntBASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC17A8Q8NDX2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 MIR661-201ENST00000384842 89 ntBASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC17A8Q8NDX2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 IGHV3-71-201ENST00000523324 359 ntBASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 LINC02560-201ENST00000596379 459 ntBASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms