Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX5Q8N196 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SIX5Q8N196 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX5Q8N196 KRT8P23-201ENST00000560090 1207 ntBASIC17.45■□□□□ 0.38
SIX5Q8N196 MIR4515-201ENST00000584082 81 ntBASIC17.45■□□□□ 0.38
SIX5Q8N196 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX5Q8N196 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
SIX5Q8N196 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX5Q8N196 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX5Q8N196 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX5Q8N196 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX5Q8N196 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX5Q8N196 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX5Q8N196 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.44■□□□□ 0.38
SIX5Q8N196 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX5Q8N196 PIN1P1-201ENST00000412108 996 ntBASIC17.44■□□□□ 0.38
SIX5Q8N196 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 RN7SL692P-201ENST00000464677 288 ntBASIC17.44■□□□□ 0.38
SIX5Q8N196 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.44■□□□□ 0.38
SIX5Q8N196 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX5Q8N196 AC107918.2-201ENST00000530817 355 ntBASIC17.44■□□□□ 0.38
SIX5Q8N196 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX5Q8N196 LINC01225-203ENST00000563550 1244 ntBASIC17.44■□□□□ 0.38
SIX5Q8N196 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.44■□□□□ 0.38
SIX5Q8N196 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
SIX5Q8N196 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SIX5Q8N196 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SIX5Q8N196 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
SIX5Q8N196 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.44■□□□□ 0.38
SIX5Q8N196 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX5Q8N196 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SIX5Q8N196 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SIX5Q8N196 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SIX5Q8N196 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SIX5Q8N196 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SIX5Q8N196 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIX5Q8N196 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX5Q8N196 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX5Q8N196 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX5Q8N196 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX5Q8N196 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX5Q8N196 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX5Q8N196 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX5Q8N196 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX5Q8N196 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX5Q8N196 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SIX5Q8N196 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX5Q8N196 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SIX5Q8N196 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX5Q8N196 TNXA-203ENST00000507684 2038 ntBASIC17.43■□□□□ 0.38
SIX5Q8N196 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIX5Q8N196 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SIX5Q8N196 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX5Q8N196 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX5Q8N196 AC046185.3-201ENST00000623228 1824 ntBASIC17.42■□□□□ 0.38
SIX5Q8N196 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.42■□□□□ 0.38
SIX5Q8N196 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SIX5Q8N196 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.42■□□□□ 0.38
SIX5Q8N196 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 GNAS-203ENST00000306120 1878 ntBASIC17.42■□□□□ 0.38
SIX5Q8N196 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX5Q8N196 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SIX5Q8N196 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms