Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 AL021920.2-201ENST00000624828 1351 ntBASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C9orf40Q8IXQ3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 PMS2P7-201ENST00000506558 1336 ntBASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 KRT8P49-201ENST00000604166 1432 ntBASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 RHOQP3-201ENST00000437982 621 ntBASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
C9orf40Q8IXQ3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C9orf40Q8IXQ3 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.71■□□□□ 0.1
C9orf40Q8IXQ3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C9orf40Q8IXQ3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 LTB4R2-202ENST00000528054 3092 ntBASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C9orf40Q8IXQ3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 TUBB7P-202ENST00000428444 1305 ntBASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 AC080080.1-201ENST00000625121 2420 ntBASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
C9orf40Q8IXQ3 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms