Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.98■□□□□ 0.47
SCN4BQ8IWT1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 AC116353.5-201ENST00000638148 1699 ntBASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.97■□□□□ 0.47
SCN4BQ8IWT1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 AC107918.2-201ENST00000530817 355 ntBASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 C20orf181-201ENST00000623918 480 ntBASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 AC106820.2-201ENST00000563775 3264 ntBASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SCN4BQ8IWT1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.96■□□□□ 0.46
SCN4BQ8IWT1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 PP12613-201ENST00000424958 2230 ntBASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms