Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 PRYP5-201ENST00000451909 266 ntBASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 AL732292.2-201ENST00000609649 430 ntBASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 AL139288.1-201ENST00000623748 933 ntBASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 AL022326.1-202ENST00000641533 845 ntBASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL3Q8IVW4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 AP002414.1-201ENST00000391405 1147 ntBASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 HCG4P8-203ENST00000443049 980 ntBASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 AL353135.1-201ENST00000606729 504 ntBASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 PCDHA14-201ENST00000506751 2298 ntBASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 NCF1C-201ENST00000438382 1427 ntBASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL3Q8IVW4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 AL121772.3-201ENST00000610840 674 ntBASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL3Q8IVW4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 AL021920.2-201ENST00000624828 1351 ntBASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms