Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 AP000692.2-201ENST00000608391 879 ntBASIC14.25□□□□□ -0.13
ZNF546Q86UE3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 AC006538.1-201ENST00000567905 1585 ntBASIC14.25□□□□□ -0.13
ZNF546Q86UE3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.24□□□□□ -0.13
ZNF546Q86UE3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 AC011506.1-201ENST00000474329 610 ntBASIC14.24□□□□□ -0.13
ZNF546Q86UE3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 AL139327.4-201ENST00000612362 153 ntBASIC14.24□□□□□ -0.13
ZNF546Q86UE3 HLA-A-202ENST00000376806 1854 ntBASIC14.24□□□□□ -0.13
ZNF546Q86UE3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF546Q86UE3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AC096733.2-201ENST00000609937 1394 ntBASIC14.23□□□□□ -0.13
ZNF546Q86UE3 MIR600HG-201ENST00000449175 5984 ntBASIC14.23□□□□□ -0.13
ZNF546Q86UE3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 ESRRAP1-201ENST00000400596 1257 ntBASIC14.23□□□□□ -0.13
ZNF546Q86UE3 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AF186192.3-201ENST00000583427 947 ntBASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 BX276092.7-203ENST00000637198 1536 ntBASIC14.23□□□□□ -0.13
ZNF546Q86UE3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms