Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 AC005332.1-201ENST00000577698 1310 ntBASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 PCED1CP-201ENST00000419887 785 ntBASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 TSPY22P-201ENST00000427496 604 ntBASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 GUSBP12-201ENST00000513727 720 ntBASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 RNF126P1-202ENST00000569893 925 ntBASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 IER3-202ENST00000376377 1350 ntBASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM53Q6P2H8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 BX276092.5-203ENST00000456199 560 ntBASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 AC132938.6-201ENST00000623828 1655 ntBASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM53Q6P2H8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM53Q6P2H8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms