Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AC005412.3-201ENST00000580309 715 ntBASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AL596442.2-201ENST00000610240 980 ntBASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AC092902.6-201ENST00000641783 218 ntBASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AC139713.2-201ENST00000641328 2723 ntBASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SWSAP1Q6NVH7 AC005332.8-201ENST00000622750 2735 ntBASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 TOP3BP1-201ENST00000420768 1380 ntBASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 PCDHB18P-201ENST00000524813 2368 ntBASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 OR6D1P-202ENST00000641007 5290 ntBASIC18.94■□□□□ 0.62
SWSAP1Q6NVH7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 HMGA1P7-201ENST00000406908 502 ntBASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 AP006288.1-201ENST00000446065 395 ntBASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SWSAP1Q6NVH7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AL353732.1-201ENST00000569618 1459 ntBASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms