Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 AP003041.3-201ENST00000527151 707 ntBASIC16.14■□□□□ 0.17
LPCAT4Q643R3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 AL603832.2-201ENST00000566195 2125 ntBASIC16.14■□□□□ 0.17
LPCAT4Q643R3 AF186192.3-201ENST00000583427 947 ntBASIC16.14■□□□□ 0.17
LPCAT4Q643R3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LPCAT4Q643R3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 DGCR10-201ENST00000609839 495 ntBASIC16.13■□□□□ 0.17
LPCAT4Q643R3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LPCAT4Q643R3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.12■□□□□ 0.17
LPCAT4Q643R3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 AC097488.1-201ENST00000507834 756 ntBASIC16.12■□□□□ 0.17
LPCAT4Q643R3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.12■□□□□ 0.17
LPCAT4Q643R3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms