Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 KRT43P-201ENST00000434019 910 ntBASIC14.62□□□□□ -0.07
LRRK2Q5S007 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 GOLGA2P4-201ENST00000441462 777 ntBASIC14.62□□□□□ -0.07
LRRK2Q5S007 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 AL033527.5-201ENST00000641382 801 ntBASIC14.62□□□□□ -0.07
LRRK2Q5S007 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 AC244093.1-201ENST00000610837 814 ntBASIC14.62□□□□□ -0.07
LRRK2Q5S007 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 WFDC1-204ENST00000613603 549 ntBASIC14.62□□□□□ -0.07
LRRK2Q5S007 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 SLC22A20-204ENST00000530038 1673 ntBASIC14.61□□□□□ -0.07
LRRK2Q5S007 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 RRP7BP-205ENST00000566851 833 ntBASIC14.61□□□□□ -0.07
LRRK2Q5S007 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 AC093525.8-201ENST00000624099 1342 ntBASIC14.61□□□□□ -0.07
LRRK2Q5S007 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 FAM21FP-201ENST00000426241 1131 ntBASIC14.61□□□□□ -0.07
LRRK2Q5S007 AC114501.2-201ENST00000439631 535 ntBASIC14.61□□□□□ -0.07
LRRK2Q5S007 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRK2Q5S007 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRK2Q5S007 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 SPDYE18-201ENST00000510091 1050 ntBASIC14.6□□□□□ -0.07
LRRK2Q5S007 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRRK2Q5S007 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LRRK2Q5S007 MIR663B-201ENST00000408361 115 ntBASIC14.6□□□□□ -0.07
LRRK2Q5S007 AC099336.1-201ENST00000417053 1171 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms