Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 MCCD1P2-201ENST00000423228 335 ntBASIC20.76■□□□□ 0.91
TNNI3KQ59H18 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 AC091167.2-201ENST00000579581 588 ntBASIC20.76■□□□□ 0.91
TNNI3KQ59H18 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 MPDU1-223ENST00000582151 728 ntBASIC20.76■□□□□ 0.91
TNNI3KQ59H18 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 TUBB8P12-201ENST00000308911 1335 ntBASIC20.76■□□□□ 0.91
TNNI3KQ59H18 TUBB7P-202ENST00000428444 1305 ntBASIC20.76■□□□□ 0.91
TNNI3KQ59H18 TUBB8P7-204ENST00000567960 1332 ntBASIC20.76■□□□□ 0.91
TNNI3KQ59H18 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 PCDHB17P-201ENST00000539533 2393 ntBASIC20.75■□□□□ 0.91
TNNI3KQ59H18 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 AC092865.5-201ENST00000545435 363 ntBASIC20.75■□□□□ 0.91
TNNI3KQ59H18 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 MIR4515-201ENST00000584082 81 ntBASIC20.75■□□□□ 0.91
TNNI3KQ59H18 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI3KQ59H18 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI3KQ59H18 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 AC074386.1-202ENST00000463561 864 ntBASIC20.73■□□□□ 0.91
TNNI3KQ59H18 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 MIR4492-201ENST00000581627 80 ntBASIC20.73■□□□□ 0.91
TNNI3KQ59H18 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.73■□□□□ 0.91
TNNI3KQ59H18 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI3KQ59H18 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms