Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.86■□□□□ 0.77
IRX3P78415 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
IRX3P78415 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
IRX3P78415 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
IRX3P78415 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX3P78415 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.86■□□□□ 0.77
IRX3P78415 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.86■□□□□ 0.77
IRX3P78415 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.85■□□□□ 0.77
IRX3P78415 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
IRX3P78415 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
IRX3P78415 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
IRX3P78415 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
IRX3P78415 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.85■□□□□ 0.77
IRX3P78415 AL035633.1-201ENST00000406139 838 ntBASIC19.85■□□□□ 0.77
IRX3P78415 AL355306.1-201ENST00000415580 579 ntBASIC19.85■□□□□ 0.77
IRX3P78415 AL627223.1-201ENST00000416693 442 ntBASIC19.85■□□□□ 0.77
IRX3P78415 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.85■□□□□ 0.77
IRX3P78415 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 FAM86C2P-203ENST00000528684 1004 ntBASIC19.85■□□□□ 0.77
IRX3P78415 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
IRX3P78415 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
IRX3P78415 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
IRX3P78415 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX3P78415 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
IRX3P78415 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
IRX3P78415 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.84■□□□□ 0.77
IRX3P78415 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.84■□□□□ 0.77
IRX3P78415 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.84■□□□□ 0.77
IRX3P78415 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
IRX3P78415 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 AL671277.1-201ENST00000429656 993 ntBASIC19.84■□□□□ 0.77
IRX3P78415 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.84■□□□□ 0.77
IRX3P78415 SPDYE11-202ENST00000450699 704 ntBASIC19.84■□□□□ 0.77
IRX3P78415 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.84■□□□□ 0.77
IRX3P78415 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
IRX3P78415 SPDYE9P-201ENST00000570642 692 ntBASIC19.84■□□□□ 0.77
IRX3P78415 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.84■□□□□ 0.77
IRX3P78415 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 SPDYE10P-202ENST00000612005 668 ntBASIC19.84■□□□□ 0.77
IRX3P78415 SPDYE8P-202ENST00000612377 668 ntBASIC19.84■□□□□ 0.77
IRX3P78415 AL645728.2-201ENST00000641974 660 ntBASIC19.84■□□□□ 0.77
IRX3P78415 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.84■□□□□ 0.77
IRX3P78415 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 AC090164.3-201ENST00000610780 2143 ntBASIC19.84■□□□□ 0.77
IRX3P78415 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IRX3P78415 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
IRX3P78415 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IRX3P78415 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
IRX3P78415 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IRX3P78415 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms