Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CDH12P55289 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH12P55289 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH12P55289 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH12P55289 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH12P55289 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 AL121956.5-201ENST00000625261 221 ntBASIC15.96■□□□□ 0.15
CDH12P55289 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH12P55289 AL662844.4-201ENST00000606367 2838 ntBASIC15.96■□□□□ 0.15
CDH12P55289 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH12P55289 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH12P55289 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH12P55289 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH12P55289 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CDH12P55289 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH12P55289 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.96■□□□□ 0.14
CDH12P55289 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH12P55289 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDH12P55289 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDH12P55289 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CDH12P55289 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH12P55289 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 AC005332.1-201ENST00000577698 1310 ntBASIC15.95■□□□□ 0.14
CDH12P55289 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH12P55289 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 AC006449.5-201ENST00000610658 2098 ntBASIC15.95■□□□□ 0.14
CDH12P55289 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH12P55289 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH12P55289 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 AC122714.2-201ENST00000502787 707 ntBASIC15.95■□□□□ 0.14
CDH12P55289 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH12P55289 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.95■□□□□ 0.14
CDH12P55289 AL049597.2-201ENST00000565575 961 ntBASIC15.95■□□□□ 0.14
CDH12P55289 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH12P55289 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 EGFEM1P-202ENST00000431685 1563 ntBASIC15.95■□□□□ 0.14
CDH12P55289 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH12P55289 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH12P55289 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH12P55289 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CDH12P55289 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 BX276092.5-203ENST00000456199 560 ntBASIC15.94■□□□□ 0.14
CDH12P55289 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH12P55289 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 NTF6B-201ENST00000591913 560 ntBASIC15.94■□□□□ 0.14
CDH12P55289 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms