Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NCKAP1LP55160 PCDHB17P-201ENST00000539533 2393 ntBASIC18.64■□□□□ 0.58
NCKAP1LP55160 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCKAP1LP55160 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NCKAP1LP55160 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.64■□□□□ 0.58
NCKAP1LP55160 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.64■□□□□ 0.58
NCKAP1LP55160 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCKAP1LP55160 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 MED15P5-201ENST00000423150 992 ntBASIC18.64■□□□□ 0.57
NCKAP1LP55160 RHOQP3-201ENST00000437982 621 ntBASIC18.64■□□□□ 0.57
NCKAP1LP55160 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 AC096734.2-201ENST00000562054 433 ntBASIC18.64■□□□□ 0.57
NCKAP1LP55160 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.64■□□□□ 0.57
NCKAP1LP55160 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKAP1LP55160 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.63■□□□□ 0.57
NCKAP1LP55160 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.63■□□□□ 0.57
NCKAP1LP55160 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.63■□□□□ 0.57
NCKAP1LP55160 KRT18P58-201ENST00000527480 1120 ntBASIC18.63■□□□□ 0.57
NCKAP1LP55160 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.63■□□□□ 0.57
NCKAP1LP55160 AC091167.2-201ENST00000579581 588 ntBASIC18.63■□□□□ 0.57
NCKAP1LP55160 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.63■□□□□ 0.57
NCKAP1LP55160 AC105020.1-201ENST00000435356 2205 ntBASIC18.63■□□□□ 0.57
NCKAP1LP55160 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.63■□□□□ 0.57
NCKAP1LP55160 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.63■□□□□ 0.57
NCKAP1LP55160 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCKAP1LP55160 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NCKAP1LP55160 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 AC005915.1-201ENST00000624912 2018 ntBASIC18.62■□□□□ 0.57
NCKAP1LP55160 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 AC022211.2-201ENST00000585075 2527 ntBASIC18.62■□□□□ 0.57
NCKAP1LP55160 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 PMS2P1-201ENST00000431037 1228 ntBASIC18.62■□□□□ 0.57
NCKAP1LP55160 KRT18P3-201ENST00000451602 1288 ntBASIC18.62■□□□□ 0.57
NCKAP1LP55160 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 AC005412.3-201ENST00000580309 715 ntBASIC18.62■□□□□ 0.57
NCKAP1LP55160 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 SLC22A20-204ENST00000530038 1673 ntBASIC18.62■□□□□ 0.57
NCKAP1LP55160 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCKAP1LP55160 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NCKAP1LP55160 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKAP1LP55160 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NCKAP1LP55160 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms