Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK7P50613 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK7P50613 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 MIR346-201ENST00000362234 95 ntBASIC18.79■□□□□ 0.6
CDK7P50613 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK7P50613 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.79■□□□□ 0.6
CDK7P50613 AC092580.3-201ENST00000430932 139 ntBASIC18.79■□□□□ 0.6
CDK7P50613 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.79■□□□□ 0.6
CDK7P50613 IGHV3-42-201ENST00000520410 361 ntBASIC18.79■□□□□ 0.6
CDK7P50613 AC069120.2-201ENST00000524091 540 ntBASIC18.79■□□□□ 0.6
CDK7P50613 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CDK7P50613 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDK7P50613 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK7P50613 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDK7P50613 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK7P50613 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDK7P50613 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK7P50613 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDK7P50613 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDK7P50613 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDK7P50613 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.78■□□□□ 0.6
CDK7P50613 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDK7P50613 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.78■□□□□ 0.6
CDK7P50613 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.78■□□□□ 0.6
CDK7P50613 CRB3P1-201ENST00000449338 276 ntBASIC18.78■□□□□ 0.6
CDK7P50613 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 AL512638.1-201ENST00000457493 794 ntBASIC18.78■□□□□ 0.6
CDK7P50613 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 ALG1L8P-201ENST00000533887 760 ntBASIC18.78■□□□□ 0.6
CDK7P50613 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 LINC01451-201ENST00000623792 534 ntBASIC18.78■□□□□ 0.6
CDK7P50613 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.78■□□□□ 0.6
CDK7P50613 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK7P50613 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK7P50613 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDK7P50613 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK7P50613 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK7P50613 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDK7P50613 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDK7P50613 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK7P50613 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK7P50613 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK7P50613 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK7P50613 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDK7P50613 CR383656.12-201ENST00000549567 513 ntBASIC18.77■□□□□ 0.6
CDK7P50613 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK7P50613 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK7P50613 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK7P50613 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK7P50613 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDK7P50613 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK7P50613 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDK7P50613 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK7P50613 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CDK7P50613 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.77■□□□□ 0.59
CDK7P50613 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK7P50613 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms