Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ABCD1P33897 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ABCD1P33897 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCD1P33897 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ABCD1P33897 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
ABCD1P33897 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ABCD1P33897 HCG4-201ENST00000418983 998 ntBASIC18.64■□□□□ 0.57
ABCD1P33897 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ABCD1P33897 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCD1P33897 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCD1P33897 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCD1P33897 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCD1P33897 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ABCD1P33897 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD1P33897 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCD1P33897 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 AC092053.1-201ENST00000605787 1936 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ABCD1P33897 FAM185BP-201ENST00000443595 716 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 HCG4B-203ENST00000450128 991 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 CXCL1P1-201ENST00000502804 216 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 AC107918.2-201ENST00000530817 355 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 OR7E47P-204ENST00000575924 449 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.63■□□□□ 0.57
ABCD1P33897 AC027601.4-201ENST00000611259 610 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 AP001350.2-201ENST00000625104 1094 ntBASIC18.63■□□□□ 0.57
ABCD1P33897 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ABCD1P33897 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
ABCD1P33897 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD1P33897 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ABCD1P33897 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ABCD1P33897 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ABCD1P33897 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ABCD1P33897 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 AC096734.2-201ENST00000562054 433 ntBASIC18.62■□□□□ 0.57
ABCD1P33897 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCD1P33897 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.62■□□□□ 0.57
ABCD1P33897 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCD1P33897 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 AC013467.2-201ENST00000605472 835 ntBASIC18.62■□□□□ 0.57
ABCD1P33897 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCD1P33897 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCD1P33897 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCD1P33897 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCD1P33897 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCD1P33897 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCD1P33897 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ABCD1P33897 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ABCD1P33897 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ABCD1P33897 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCD1P33897 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD1P33897 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCD1P33897 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms