Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.74■□□□□ 0.43
H2AFXP16104 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 MYCLP1-201ENST00000372451 1075 ntBASIC17.74■□□□□ 0.43
H2AFXP16104 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.74■□□□□ 0.43
H2AFXP16104 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.74■□□□□ 0.43
H2AFXP16104 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.74■□□□□ 0.43
H2AFXP16104 AP003041.3-201ENST00000527151 707 ntBASIC17.74■□□□□ 0.43
H2AFXP16104 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.74■□□□□ 0.43
H2AFXP16104 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.74■□□□□ 0.43
H2AFXP16104 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
H2AFXP16104 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
H2AFXP16104 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
H2AFXP16104 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
H2AFXP16104 AC006449.6-201ENST00000612330 2296 ntBASIC17.74■□□□□ 0.43
H2AFXP16104 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
H2AFXP16104 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.74■□□□□ 0.43
H2AFXP16104 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
H2AFXP16104 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.74■□□□□ 0.43
H2AFXP16104 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.74■□□□□ 0.43
H2AFXP16104 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
H2AFXP16104 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.73■□□□□ 0.43
H2AFXP16104 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
H2AFXP16104 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
H2AFXP16104 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.73■□□□□ 0.43
H2AFXP16104 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
H2AFXP16104 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.73■□□□□ 0.43
H2AFXP16104 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
H2AFXP16104 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 GPR89P-201ENST00000407924 1495 ntBASIC17.73■□□□□ 0.43
H2AFXP16104 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
H2AFXP16104 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.73■□□□□ 0.43
H2AFXP16104 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2AFXP16104 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
H2AFXP16104 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.72■□□□□ 0.43
H2AFXP16104 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.72■□□□□ 0.43
H2AFXP16104 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.72■□□□□ 0.43
H2AFXP16104 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.72■□□□□ 0.43
H2AFXP16104 AC096633.1-201ENST00000422446 749 ntBASIC17.72■□□□□ 0.43
H2AFXP16104 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms