Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.37□□□□□ -0.27
CD28P10747 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.37□□□□□ -0.27
CD28P10747 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CD28P10747 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.37□□□□□ -0.27
CD28P10747 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD28P10747 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CD28P10747 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.36□□□□□ -0.27
CD28P10747 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CD28P10747 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CD28P10747 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.36□□□□□ -0.27
CD28P10747 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.36□□□□□ -0.27
CD28P10747 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 AL513480.1-201ENST00000451731 511 ntBASIC13.36□□□□□ -0.27
CD28P10747 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.36□□□□□ -0.27
CD28P10747 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.36□□□□□ -0.27
CD28P10747 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.36□□□□□ -0.27
CD28P10747 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.36□□□□□ -0.27
CD28P10747 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 AC091812.2-201ENST00000619081 385 ntBASIC13.36□□□□□ -0.27
CD28P10747 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CD28P10747 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD28P10747 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.36□□□□□ -0.27
CD28P10747 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CD28P10747 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CD28P10747 FAM185BP-201ENST00000443595 716 ntBASIC13.35□□□□□ -0.27
CD28P10747 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.35□□□□□ -0.27
CD28P10747 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.35□□□□□ -0.27
CD28P10747 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CD28P10747 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CD28P10747 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.35□□□□□ -0.27
CD28P10747 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 NOC2LP2-201ENST00000407594 1944 ntBASIC13.35□□□□□ -0.27
CD28P10747 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD28P10747 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CD28P10747 AC012317.2-201ENST00000623305 2251 ntBASIC13.34□□□□□ -0.27
CD28P10747 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms