Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 AC073592.8-201ENST00000624126 511 ntBASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC22.47■■□□□ 1.19
CSB-PGBD3P0DP91 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 AL138918.1-201ENST00000568306 659 ntBASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 AL358472.5-202ENST00000641448 1267 ntBASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 AC012317.2-201ENST00000623305 2251 ntBASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC22.46■■□□□ 1.19
CSB-PGBD3P0DP91 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC22.45■■□□□ 1.19
CSB-PGBD3P0DP91 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
CSB-PGBD3P0DP91 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AL008721.1-201ENST00000609964 604 ntBASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AL662799.1-202ENST00000614205 422 ntBASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AC100757.3-201ENST00000622361 1406 ntBASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CSB-PGBD3P0DP91 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 PXK-206ENST00000463280 2825 ntTSL 2 BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 PIN1P1-201ENST00000412108 996 ntBASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 MRPS18AP1-201ENST00000414458 589 ntBASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 COQ9-214ENST00000567933 882 ntTSL 3 BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 AC091167.2-201ENST00000579581 588 ntBASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.44■■□□□ 1.18
CSB-PGBD3P0DP91 AC009118.2-201ENST00000613275 655 ntBASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms