Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM17P0DL12 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM17P0DL12 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SMIM17P0DL12 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM17P0DL12 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM17P0DL12 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM17P0DL12 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM17P0DL12 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 REXO1L11P-201ENST00000620964 1927 ntBASIC12.78□□□□□ -0.36
SMIM17P0DL12 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 AC009947.2-201ENST00000444014 672 ntBASIC12.78□□□□□ -0.36
SMIM17P0DL12 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.78□□□□□ -0.36
SMIM17P0DL12 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM17P0DL12 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM17P0DL12 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SMIM17P0DL12 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM17P0DL12 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM17P0DL12 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM17P0DL12 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.77□□□□□ -0.36
SMIM17P0DL12 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM17P0DL12 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.36
SMIM17P0DL12 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM17P0DL12 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM17P0DL12 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM17P0DL12 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.77□□□□□ -0.36
SMIM17P0DL12 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.77□□□□□ -0.36
SMIM17P0DL12 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.77□□□□□ -0.36
SMIM17P0DL12 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SMIM17P0DL12 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SMIM17P0DL12 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM17P0DL12 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 MIR718-201ENST00000390190 70 ntBASIC12.77□□□□□ -0.37
SMIM17P0DL12 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 MIR1238-201ENST00000408483 83 ntBASIC12.77□□□□□ -0.37
SMIM17P0DL12 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 FITM1-202ENST00000559294 800 ntBASIC12.77□□□□□ -0.37
SMIM17P0DL12 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 AP000525.1-201ENST00000608286 694 ntBASIC12.77□□□□□ -0.37
SMIM17P0DL12 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 HYMAI-201ENST00000635591 3347 ntBASIC12.77□□□□□ -0.37
SMIM17P0DL12 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 AL603756.1-201ENST00000606511 2163 ntBASIC12.77□□□□□ -0.37
SMIM17P0DL12 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM17P0DL12 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SMIM17P0DL12 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM17P0DL12 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.76□□□□□ -0.37
SMIM17P0DL12 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.76□□□□□ -0.37
SMIM17P0DL12 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM17P0DL12 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms