Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 HLA-A-201ENST00000376802 1334 ntBASIC17.3■□□□□ 0.36
HLA-DQB2P05538 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 SLC25A6P2-201ENST00000497974 877 ntBASIC17.3■□□□□ 0.36
HLA-DQB2P05538 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 AL662844.1-201ENST00000546340 181 ntBASIC17.3■□□□□ 0.36
HLA-DQB2P05538 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 AP001005.1-201ENST00000571755 1248 ntBASIC17.3■□□□□ 0.36
HLA-DQB2P05538 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 AC008667.4-201ENST00000607370 168 ntBASIC17.3■□□□□ 0.36
HLA-DQB2P05538 AF228730.7-201ENST00000641842 219 ntBASIC17.3■□□□□ 0.36
HLA-DQB2P05538 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB2P05538 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 AC078925.2-201ENST00000624013 1973 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 AC002310.6-201ENST00000624451 1377 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 TUBB8P12-201ENST00000308911 1335 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 TUBB7P-202ENST00000428444 1305 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 TUBB8P7-204ENST00000567960 1332 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 IGHV3-65-201ENST00000523210 341 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 AC116407.3-201ENST00000623905 1129 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 AC005593.1-201ENST00000624894 515 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 AGGF1P2-201ENST00000426656 2106 ntBASIC17.29■□□□□ 0.36
HLA-DQB2P05538 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQB2P05538 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms