Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
CD74P04233 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.39□□□□□ -0.11
CD74P04233 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 HLA-F-220ENST00000434407 884 ntBASIC14.39□□□□□ -0.11
CD74P04233 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.39□□□□□ -0.11
CD74P04233 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 RASA4DP-201ENST00000460726 1199 ntBASIC14.39□□□□□ -0.11
CD74P04233 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.39□□□□□ -0.11
CD74P04233 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.39□□□□□ -0.11
CD74P04233 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 GCSHP2-201ENST00000560971 527 ntBASIC14.39□□□□□ -0.11
CD74P04233 STK25P1-201ENST00000585406 838 ntBASIC14.39□□□□□ -0.11
CD74P04233 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 ITM2C-210ENST00000620962 501 ntBASIC14.39□□□□□ -0.11
CD74P04233 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.39□□□□□ -0.11
CD74P04233 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.39□□□□□ -0.11
CD74P04233 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CD74P04233 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.39□□□□□ -0.11
CD74P04233 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.39□□□□□ -0.11
CD74P04233 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD74P04233 AL049757.1-201ENST00000616842 1596 ntBASIC14.39□□□□□ -0.11
CD74P04233 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.38□□□□□ -0.11
CD74P04233 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CD74P04233 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CD74P04233 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD74P04233 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 ECEL1P3-201ENST00000427961 737 ntBASIC14.38□□□□□ -0.11
CD74P04233 AC007967.3-201ENST00000434308 558 ntBASIC14.38□□□□□ -0.11
CD74P04233 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.38□□□□□ -0.11
CD74P04233 AP003733.1-201ENST00000491725 852 ntBASIC14.38□□□□□ -0.11
CD74P04233 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.38□□□□□ -0.11
CD74P04233 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.38□□□□□ -0.11
CD74P04233 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 AC111152.3-201ENST00000569699 673 ntBASIC14.38□□□□□ -0.11
CD74P04233 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.38□□□□□ -0.11
CD74P04233 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.38□□□□□ -0.11
CD74P04233 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD74P04233 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD74P04233 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD74P04233 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.37□□□□□ -0.11
CD74P04233 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD74P04233 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms