Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 AP002982.1-201ENST00000492365 877 ntBASIC12.9□□□□□ -0.34
HLA-DQA1P01909 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 AC008687.5-201ENST00000593746 558 ntBASIC12.9□□□□□ -0.34
HLA-DQA1P01909 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DQA1P01909 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
HLA-DQA1P01909 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
HLA-DQA1P01909 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.9□□□□□ -0.35
HLA-DQA1P01909 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HLA-DQA1P01909 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.9□□□□□ -0.35
HLA-DQA1P01909 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HLA-DQA1P01909 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
HLA-DQA1P01909 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 AC142381.4-202ENST00000563973 229 ntBASIC12.89□□□□□ -0.35
HLA-DQA1P01909 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 OR2I1P-210ENST00000642037 4691 ntBASIC12.89□□□□□ -0.35
HLA-DQA1P01909 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 HLA-A-202ENST00000376806 1854 ntBASIC12.89□□□□□ -0.35
HLA-DQA1P01909 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DQA1P01909 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 BX276092.7-203ENST00000637198 1536 ntBASIC12.88□□□□□ -0.35
HLA-DQA1P01909 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.88□□□□□ -0.35
HLA-DQA1P01909 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 ABHD17AP1-201ENST00000358206 933 ntBASIC12.88□□□□□ -0.35
HLA-DQA1P01909 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms