Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IFNA1P01562 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
IFNA1P01562 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.56□□□□□ -0.24
IFNA1P01562 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
IFNA1P01562 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.56□□□□□ -0.24
IFNA1P01562 AC104390.1-201ENST00000555663 520 ntBASIC13.56□□□□□ -0.24
IFNA1P01562 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.56□□□□□ -0.24
IFNA1P01562 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.56□□□□□ -0.24
IFNA1P01562 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.56□□□□□ -0.24
IFNA1P01562 AL353708.3-201ENST00000610272 989 ntBASIC13.56□□□□□ -0.24
IFNA1P01562 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.56□□□□□ -0.24
IFNA1P01562 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.56□□□□□ -0.24
IFNA1P01562 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
IFNA1P01562 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
IFNA1P01562 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.56□□□□□ -0.24
IFNA1P01562 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IFNA1P01562 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.56□□□□□ -0.24
IFNA1P01562 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
IFNA1P01562 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
IFNA1P01562 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.56□□□□□ -0.24
IFNA1P01562 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.56□□□□□ -0.24
IFNA1P01562 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
IFNA1P01562 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 AC239809.2-201ENST00000415381 517 ntBASIC13.55□□□□□ -0.24
IFNA1P01562 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 AC008040.2-201ENST00000461049 708 ntBASIC13.55□□□□□ -0.24
IFNA1P01562 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.55□□□□□ -0.24
IFNA1P01562 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.55□□□□□ -0.24
IFNA1P01562 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
IFNA1P01562 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.55□□□□□ -0.24
IFNA1P01562 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
IFNA1P01562 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IFNA1P01562 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.55□□□□□ -0.24
IFNA1P01562 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
IFNA1P01562 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.54□□□□□ -0.24
IFNA1P01562 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.54□□□□□ -0.24
IFNA1P01562 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.54□□□□□ -0.24
IFNA1P01562 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
IFNA1P01562 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms