Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.99■□□□□ 0.31
PDGFBP01127 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDGFBP01127 RN7SL828P-201ENST00000607615 303 ntBASIC16.99■□□□□ 0.31
PDGFBP01127 MIR6787-201ENST00000616675 61 ntBASIC16.99■□□□□ 0.31
PDGFBP01127 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
PDGFBP01127 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFBP01127 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.99■□□□□ 0.31
PDGFBP01127 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.99■□□□□ 0.31
PDGFBP01127 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PDGFBP01127 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PDGFBP01127 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFBP01127 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFBP01127 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDGFBP01127 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PDGFBP01127 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDGFBP01127 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PDGFBP01127 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.99■□□□□ 0.31
PDGFBP01127 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.99■□□□□ 0.31
PDGFBP01127 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PDGFBP01127 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.98■□□□□ 0.31
PDGFBP01127 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 BCYRN1-201ENST00000418539 200 ntBASIC16.98■□□□□ 0.31
PDGFBP01127 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.98■□□□□ 0.31
PDGFBP01127 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 MIR3909-201ENST00000579518 119 ntBASIC16.98■□□□□ 0.31
PDGFBP01127 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 AC133552.6-201ENST00000613406 534 ntBASIC16.98■□□□□ 0.31
PDGFBP01127 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.98■□□□□ 0.31
PDGFBP01127 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PDGFBP01127 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.98■□□□□ 0.31
PDGFBP01127 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.98■□□□□ 0.31
PDGFBP01127 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.98■□□□□ 0.31
PDGFBP01127 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.98■□□□□ 0.31
PDGFBP01127 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDGFBP01127 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFBP01127 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.97■□□□□ 0.31
PDGFBP01127 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFBP01127 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFBP01127 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFBP01127 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.97■□□□□ 0.31
PDGFBP01127 AC234783.1-201ENST00000441761 496 ntBASIC16.97■□□□□ 0.31
PDGFBP01127 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PDGFBP01127 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFBP01127 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFBP01127 AC073389.1-201ENST00000595595 795 ntBASIC16.97■□□□□ 0.31
PDGFBP01127 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFBP01127 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.97■□□□□ 0.31
PDGFBP01127 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFBP01127 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.96■□□□□ 0.31
PDGFBP01127 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PDGFBP01127 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.96■□□□□ 0.31
PDGFBP01127 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDGFBP01127 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDGFBP01127 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 ANKRD19P-201ENST00000338192 862 ntBASIC16.96■□□□□ 0.31
PDGFBP01127 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDGFBP01127 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDGFBP01127 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFBP01127 AL353705.2-201ENST00000428243 662 ntBASIC16.96■□□□□ 0.31
PDGFBP01127 CROCCP4-201ENST00000457096 498 ntBASIC16.96■□□□□ 0.31
PDGFBP01127 AC093004.1-201ENST00000508850 424 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms