Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.07■□□□□ 0.48
ZBED1O96006 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.07■□□□□ 0.48
ZBED1O96006 RPL13AP23-201ENST00000480739 586 ntBASIC18.07■□□□□ 0.48
ZBED1O96006 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.07■□□□□ 0.48
ZBED1O96006 RNA5SP415-201ENST00000517246 115 ntBASIC18.07■□□□□ 0.48
ZBED1O96006 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZBED1O96006 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
ZBED1O96006 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZBED1O96006 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZBED1O96006 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZBED1O96006 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.06■□□□□ 0.48
ZBED1O96006 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.06■□□□□ 0.48
ZBED1O96006 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
ZBED1O96006 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZBED1O96006 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ZBED1O96006 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.06■□□□□ 0.48
ZBED1O96006 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 AP002414.1-201ENST00000391405 1147 ntBASIC18.06■□□□□ 0.48
ZBED1O96006 SLC25A1P3-201ENST00000395415 828 ntBASIC18.06■□□□□ 0.48
ZBED1O96006 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 UNC93B6-202ENST00000528242 690 ntBASIC18.06■□□□□ 0.48
ZBED1O96006 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.06■□□□□ 0.48
ZBED1O96006 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.06■□□□□ 0.48
ZBED1O96006 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ZBED1O96006 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.06■□□□□ 0.48
ZBED1O96006 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.06■□□□□ 0.48
ZBED1O96006 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ZBED1O96006 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZBED1O96006 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ZBED1O96006 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 AL022342.1-201ENST00000400363 863 ntBASIC18.05■□□□□ 0.48
ZBED1O96006 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.05■□□□□ 0.48
ZBED1O96006 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 SLC25A1P1-201ENST00000528351 927 ntBASIC18.05■□□□□ 0.48
ZBED1O96006 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.05■□□□□ 0.48
ZBED1O96006 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.05■□□□□ 0.48
ZBED1O96006 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 AC008667.4-201ENST00000607370 168 ntBASIC18.05■□□□□ 0.48
ZBED1O96006 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
ZBED1O96006 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZBED1O96006 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZBED1O96006 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.04■□□□□ 0.48
ZBED1O96006 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZBED1O96006 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZBED1O96006 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ZBED1O96006 CROCCP1-201ENST00000426910 5675 ntBASIC18.04■□□□□ 0.48
ZBED1O96006 PCDHA12-202ENST00000613593 2588 ntBASIC18.04■□□□□ 0.48
ZBED1O96006 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.04■□□□□ 0.48
ZBED1O96006 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.04■□□□□ 0.48
ZBED1O96006 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
ZBED1O96006 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZBED1O96006 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZBED1O96006 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZBED1O96006 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ZBED1O96006 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZBED1O96006 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.04■□□□□ 0.48
ZBED1O96006 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.04■□□□□ 0.48
ZBED1O96006 IGHV3-65-201ENST00000523210 341 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms