Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.62■□□□□ 0.73
MBD3O95983 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.62■□□□□ 0.73
MBD3O95983 HLA-J-202ENST00000469281 1241 ntBASIC19.62■□□□□ 0.73
MBD3O95983 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD3O95983 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MBD3O95983 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD3O95983 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD3O95983 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.62■□□□□ 0.73
MBD3O95983 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MBD3O95983 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD3O95983 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD3O95983 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.62■□□□□ 0.73
MBD3O95983 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MBD3O95983 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD3O95983 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
MBD3O95983 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MBD3O95983 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD3O95983 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 MIR718-201ENST00000390190 70 ntBASIC19.61■□□□□ 0.73
MBD3O95983 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD3O95983 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD3O95983 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
MBD3O95983 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
MBD3O95983 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.61■□□□□ 0.73
MBD3O95983 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.61■□□□□ 0.73
MBD3O95983 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD3O95983 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD3O95983 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MBD3O95983 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD3O95983 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3O95983 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
MBD3O95983 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.61■□□□□ 0.73
MBD3O95983 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD3O95983 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MBD3O95983 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MBD3O95983 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
MBD3O95983 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 AC103564.2-201ENST00000432853 1299 ntBASIC19.6■□□□□ 0.73
MBD3O95983 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD3O95983 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.6■□□□□ 0.73
MBD3O95983 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MBD3O95983 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3O95983 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD3O95983 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 AL356309.3-201ENST00000624132 1934 ntBASIC19.59■□□□□ 0.73
MBD3O95983 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD3O95983 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD3O95983 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms