Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 FAM220CP-201ENST00000395253 831 ntBASIC17.16■□□□□ 0.34
RFPL1O75677 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.16■□□□□ 0.34
RFPL1O75677 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RFPL1O75677 AP002469.2-201ENST00000531724 424 ntBASIC17.16■□□□□ 0.34
RFPL1O75677 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.16■□□□□ 0.34
RFPL1O75677 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.16■□□□□ 0.34
RFPL1O75677 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 AC023511.2-201ENST00000618803 211 ntBASIC17.16■□□□□ 0.34
RFPL1O75677 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.16■□□□□ 0.34
RFPL1O75677 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RFPL1O75677 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
RFPL1O75677 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.16■□□□□ 0.34
RFPL1O75677 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RFPL1O75677 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 AC233702.3-201ENST00000578656 1387 ntBASIC17.15■□□□□ 0.34
RFPL1O75677 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RFPL1O75677 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RFPL1O75677 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.15■□□□□ 0.34
RFPL1O75677 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.15■□□□□ 0.34
RFPL1O75677 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RFPL1O75677 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
RFPL1O75677 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.15■□□□□ 0.34
RFPL1O75677 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 VENTXP7-201ENST00000475503 772 ntBASIC17.15■□□□□ 0.34
RFPL1O75677 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.15■□□□□ 0.34
RFPL1O75677 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 AC106795.1-205ENST00000512851 1056 ntBASIC17.15■□□□□ 0.34
RFPL1O75677 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 AC099336.1-202ENST00000602961 463 ntBASIC17.15■□□□□ 0.34
RFPL1O75677 AL592071.1-201ENST00000611956 408 ntBASIC17.15■□□□□ 0.34
RFPL1O75677 AC124864.1-201ENST00000623408 392 ntBASIC17.15■□□□□ 0.34
RFPL1O75677 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
RFPL1O75677 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RFPL1O75677 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.15■□□□□ 0.34
RFPL1O75677 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFPL1O75677 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.15■□□□□ 0.34
RFPL1O75677 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RFPL1O75677 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.14■□□□□ 0.33
RFPL1O75677 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.14■□□□□ 0.33
RFPL1O75677 AL645728.1-201ENST00000366221 2101 ntBASIC17.14■□□□□ 0.33
RFPL1O75677 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RFPL1O75677 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.14■□□□□ 0.33
RFPL1O75677 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 GPR89P-201ENST00000407924 1495 ntBASIC17.14■□□□□ 0.33
RFPL1O75677 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RFPL1O75677 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.14■□□□□ 0.33
RFPL1O75677 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
RFPL1O75677 AC079776.4-201ENST00000511039 504 ntBASIC17.14■□□□□ 0.33
RFPL1O75677 AL121912.1-201ENST00000603683 238 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms