Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL732292.2-201ENST00000609649 430 ntBASIC17.17■□□□□ 0.34
GPC4O75487 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.17■□□□□ 0.34
GPC4O75487 AC073592.5-201ENST00000624854 528 ntBASIC17.17■□□□□ 0.34
GPC4O75487 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 AC011270.2-201ENST00000624293 2550 ntBASIC17.17■□□□□ 0.34
GPC4O75487 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC4O75487 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC4O75487 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC4O75487 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 AC016396.2-201ENST00000562575 1417 ntBASIC17.16■□□□□ 0.34
GPC4O75487 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC4O75487 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC4O75487 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC4O75487 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC4O75487 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC4O75487 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC4O75487 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC4O75487 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC4O75487 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC4O75487 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC4O75487 FLJ16779-201ENST00000612722 7638 ntBASIC17.15■□□□□ 0.34
GPC4O75487 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GPC4O75487 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC4O75487 AP005117.1-201ENST00000584346 1413 ntBASIC17.15■□□□□ 0.34
GPC4O75487 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GPC4O75487 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 AC003669.1-201ENST00000334569 611 ntBASIC17.15■□□□□ 0.34
GPC4O75487 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
GPC4O75487 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.15■□□□□ 0.34
GPC4O75487 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.15■□□□□ 0.34
GPC4O75487 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.15■□□□□ 0.34
GPC4O75487 AC106795.1-205ENST00000512851 1056 ntBASIC17.15■□□□□ 0.34
GPC4O75487 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC4O75487 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 AP001269.4-201ENST00000609611 512 ntBASIC17.15■□□□□ 0.34
GPC4O75487 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC4O75487 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC4O75487 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GPC4O75487 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC4O75487 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GPC4O75487 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC4O75487 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC4O75487 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GPC4O75487 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.14■□□□□ 0.34
GPC4O75487 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
GPC4O75487 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GPC4O75487 AC106886.4-201ENST00000623557 2502 ntBASIC17.14■□□□□ 0.33
GPC4O75487 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC4O75487 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC4O75487 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC4O75487 DUSP5P1-201ENST00000441325 1139 ntBASIC17.14■□□□□ 0.33
GPC4O75487 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.14■□□□□ 0.33
GPC4O75487 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.14■□□□□ 0.33
GPC4O75487 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC4O75487 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms