Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MSI1O43347 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MSI1O43347 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
MSI1O43347 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
MSI1O43347 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MSI1O43347 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.71■□□□□ 0.43
MSI1O43347 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.71■□□□□ 0.43
MSI1O43347 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.71■□□□□ 0.43
MSI1O43347 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSI1O43347 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSI1O43347 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MSI1O43347 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSI1O43347 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MSI1O43347 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MSI1O43347 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
MSI1O43347 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.71■□□□□ 0.42
MSI1O43347 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
MSI1O43347 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MSI1O43347 AC092068.3-201ENST00000587894 2016 ntBASIC17.71■□□□□ 0.42
MSI1O43347 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MSI1O43347 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MSI1O43347 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MSI1O43347 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
MSI1O43347 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.7■□□□□ 0.42
MSI1O43347 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
MSI1O43347 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MSI1O43347 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.7■□□□□ 0.42
MSI1O43347 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.7■□□□□ 0.42
MSI1O43347 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.7■□□□□ 0.42
MSI1O43347 CXCL1P1-201ENST00000502804 216 ntBASIC17.7■□□□□ 0.42
MSI1O43347 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.7■□□□□ 0.42
MSI1O43347 DUX4L17-201ENST00000557360 1267 ntBASIC17.7■□□□□ 0.42
MSI1O43347 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.7■□□□□ 0.42
MSI1O43347 ACTL9-202ENST00000612068 1252 ntBASIC17.7■□□□□ 0.42
MSI1O43347 AC023511.2-201ENST00000618803 211 ntBASIC17.7■□□□□ 0.42
MSI1O43347 AL513190.1-201ENST00000621254 727 ntBASIC17.7■□□□□ 0.42
MSI1O43347 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.7■□□□□ 0.42
MSI1O43347 AC092865.6-201ENST00000642101 219 ntBASIC17.7■□□□□ 0.42
MSI1O43347 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MSI1O43347 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.7■□□□□ 0.42
MSI1O43347 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.7■□□□□ 0.42
MSI1O43347 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.7■□□□□ 0.42
MSI1O43347 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.7■□□□□ 0.42
MSI1O43347 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.69■□□□□ 0.42
MSI1O43347 AC060834.1-201ENST00000443027 2032 ntBASIC17.69■□□□□ 0.42
MSI1O43347 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.69■□□□□ 0.42
MSI1O43347 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.69■□□□□ 0.42
MSI1O43347 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.69■□□□□ 0.42
MSI1O43347 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
MSI1O43347 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.69■□□□□ 0.42
MSI1O43347 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
MSI1O43347 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MSI1O43347 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSI1O43347 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms