Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN4O14493 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN4O14493 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN4O14493 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CLDN4O14493 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.1■□□□□ 0.17
CLDN4O14493 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CLDN4O14493 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 SLC25A1P3-201ENST00000395415 828 ntBASIC16.1■□□□□ 0.17
CLDN4O14493 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.1■□□□□ 0.17
CLDN4O14493 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN4O14493 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN4O14493 IGHV3-22-201ENST00000520721 359 ntBASIC16.1■□□□□ 0.17
CLDN4O14493 IGHV3-65-201ENST00000523210 341 ntBASIC16.1■□□□□ 0.17
CLDN4O14493 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN4O14493 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.1■□□□□ 0.17
CLDN4O14493 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN4O14493 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN4O14493 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN4O14493 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN4O14493 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN4O14493 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN4O14493 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN4O14493 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN4O14493 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN4O14493 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 RPL13AP23-201ENST00000480739 586 ntBASIC16.09■□□□□ 0.17
CLDN4O14493 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 RNA5SP415-201ENST00000517246 115 ntBASIC16.09■□□□□ 0.17
CLDN4O14493 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN4O14493 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 AC120114.3-201ENST00000611923 658 ntBASIC16.09■□□□□ 0.17
CLDN4O14493 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN4O14493 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 ZNF259P1-201ENST00000407656 1365 ntBASIC16.09■□□□□ 0.17
CLDN4O14493 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN4O14493 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN4O14493 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN4O14493 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN4O14493 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN4O14493 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN4O14493 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN4O14493 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN4O14493 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN4O14493 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN4O14493 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLDN4O14493 AL645608.8-201ENST00000606034 2086 ntBASIC16.08■□□□□ 0.16
CLDN4O14493 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms