Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.59□□□□□ -0.07
SDCBPO00560 AL136038.3-201ENST00000561909 1096 ntBASIC14.59□□□□□ -0.07
SDCBPO00560 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.59□□□□□ -0.07
SDCBPO00560 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.59□□□□□ -0.07
SDCBPO00560 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.59□□□□□ -0.07
SDCBPO00560 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.59□□□□□ -0.07
SDCBPO00560 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.59□□□□□ -0.07
SDCBPO00560 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.59□□□□□ -0.07
SDCBPO00560 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.59□□□□□ -0.07
SDCBPO00560 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.59□□□□□ -0.07
SDCBPO00560 AC006449.5-201ENST00000610658 2098 ntBASIC14.59□□□□□ -0.07
SDCBPO00560 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SDCBPO00560 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
SDCBPO00560 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SDCBPO00560 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SDCBPO00560 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
SDCBPO00560 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SDCBPO00560 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.58□□□□□ -0.07
SDCBPO00560 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.58□□□□□ -0.07
SDCBPO00560 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SDCBPO00560 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SDCBPO00560 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SDCBPO00560 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.58□□□□□ -0.08
SDCBPO00560 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.58□□□□□ -0.08
SDCBPO00560 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SDCBPO00560 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.58□□□□□ -0.08
SDCBPO00560 AC090616.6-201ENST00000582640 721 ntBASIC14.58□□□□□ -0.08
SDCBPO00560 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SDCBPO00560 IGHV3-41-201ENST00000613121 348 ntBASIC14.58□□□□□ -0.08
SDCBPO00560 AC124864.1-201ENST00000623408 392 ntBASIC14.58□□□□□ -0.08
SDCBPO00560 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.58□□□□□ -0.08
SDCBPO00560 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.58□□□□□ -0.08
SDCBPO00560 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.58□□□□□ -0.08
SDCBPO00560 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SDCBPO00560 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SDCBPO00560 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.58□□□□□ -0.08
SDCBPO00560 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDCBPO00560 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SDCBPO00560 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 TSPY26P-202ENST00000565928 3884 ntBASIC14.57□□□□□ -0.08
SDCBPO00560 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.57□□□□□ -0.08
SDCBPO00560 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SDCBPO00560 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.57□□□□□ -0.08
SDCBPO00560 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.57□□□□□ -0.08
SDCBPO00560 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.57□□□□□ -0.08
SDCBPO00560 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.57□□□□□ -0.08
SDCBPO00560 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.57□□□□□ -0.08
SDCBPO00560 AL592071.1-201ENST00000611956 408 ntBASIC14.57□□□□□ -0.08
SDCBPO00560 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 PCDHB17P-201ENST00000539533 2393 ntBASIC14.57□□□□□ -0.08
SDCBPO00560 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 AC132872.4-202ENST00000622924 2756 ntBASIC14.57□□□□□ -0.08
SDCBPO00560 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.57□□□□□ -0.08
SDCBPO00560 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDCBPO00560 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms