Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AC079140.4-201ENST00000507448 529 ntBASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 IGHV3-19-201ENST00000521488 291 ntBASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AC243732.1-201ENST00000612648 864 ntBASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CHKB-CPT1BH3BT56 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 AC092068.3-201ENST00000587894 2016 ntBASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 HEIH-201ENST00000623091 1652 ntBASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
CHKB-CPT1BH3BT56 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 SNX3-202ENST00000349379 890 ntTSL 2 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 FGF8-207ENST00000618991 856 ntTSL 3 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
CHKB-CPT1BH3BT56 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms