Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 AC092910.1-201ENST00000482027 1129 ntBASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 RPS15P9-201ENST00000494093 319 ntBASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 AC079776.4-201ENST00000511039 504 ntBASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 RNA5SP419-201ENST00000515908 135 ntBASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 AC116407.3-201ENST00000623905 1129 ntBASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMIM9A6NGZ8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SMIM9A6NGZ8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
SMIM9A6NGZ8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SMIM9A6NGZ8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 AC006504.4-201ENST00000592118 1568 ntBASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 PTCHD3P3-201ENST00000403073 906 ntBASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 ELK2BP-201ENST00000415014 1224 ntBASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 AC124947.2-201ENST00000547118 1133 ntBASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 TERC-201ENST00000602385 541 ntBASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 MIR7706-201ENST00000613747 67 ntBASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SMIM9A6NGZ8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 PI4KAP1-204ENST00000612579 1703 ntBASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 AL590627.1-203ENST00000421194 1026 ntBASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 IGHV3-65-201ENST00000523210 341 ntBASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SMIM9A6NGZ8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms