Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GOLGA6L4A6NEF3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
GOLGA6L4A6NEF3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
GOLGA6L4A6NEF3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GOLGA6L4A6NEF3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
GOLGA6L4A6NEF3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 AK4P3-201ENST00000418260 669 ntBASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 AC125634.1-201ENST00000438758 1403 ntBASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 AC126755.1-201ENST00000525846 6405 ntBASIC19.76■□□□□ 0.75
GOLGA6L4A6NEF3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 AL049757.1-201ENST00000616842 1596 ntBASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 KRT8P10-201ENST00000450021 1447 ntBASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.75■□□□□ 0.75
GOLGA6L4A6NEF3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms